Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb4Q91XZ6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Gm15770-201ENSMUST00000117498 584 ntBASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Gm17795-201ENSMUST00000214505 757 ntBASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Gm5867-201ENSMUST00000063197 592 ntBASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb4Q91XZ6 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Gm9522-201ENSMUST00000182394 926 ntBASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Gm44872-201ENSMUST00000207864 420 ntBASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb4Q91XZ6 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms