Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Gm43630-201ENSMUST00000201550 776 ntBASIC15.28■□□□□ 0.04
Ddx41Q91VN6 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Gm9899-201ENSMUST00000065519 555 ntBASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Gm27847-201ENSMUST00000183711 107 ntBASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Gm27375-201ENSMUST00000183799 107 ntBASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Gm6091-201ENSMUST00000098307 165 ntBASIC15.27■□□□□ 0.04
Ddx41Q91VN6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Ddx41Q91VN6 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ddx41Q91VN6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx41Q91VN6 Mbnl2-204ENSMUST00000227012 2390 ntBASIC15.27■□□□□ 0.03
Ddx41Q91VN6 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ddx41Q91VN6 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Ddx41Q91VN6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx41Q91VN6 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ddx41Q91VN6 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx41Q91VN6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx41Q91VN6 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx41Q91VN6 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ddx41Q91VN6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx41Q91VN6 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx41Q91VN6 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.27■□□□□ 0.03
Ddx41Q91VN6 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.27■□□□□ 0.03
Ddx41Q91VN6 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx41Q91VN6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx41Q91VN6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Gm13612-201ENSMUST00000119276 390 ntBASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx41Q91VN6 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms