Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H1fooQ8VIK3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Syt7-204ENSMUST00000223586 1344 ntBASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Gm14057-201ENSMUST00000120631 482 ntBASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H1fooQ8VIK3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
H1fooQ8VIK3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
H1fooQ8VIK3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
H1fooQ8VIK3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.63
H1fooQ8VIK3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
H1fooQ8VIK3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
H1fooQ8VIK3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
H1fooQ8VIK3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Gm15678-201ENSMUST00000117573 960 ntBASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Gm15321-201ENSMUST00000121290 288 ntBASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Gm12403-201ENSMUST00000121384 959 ntBASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Gm5161-201ENSMUST00000075243 853 ntBASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Gm24447-201ENSMUST00000083977 338 ntBASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms