Protein–RNA interactions for Protein: Q8VHT7

Gtf3a, Transcription factor IIIA, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3aQ8VHT7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3aQ8VHT7 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3aQ8VHT7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
Gtf3aQ8VHT7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3aQ8VHT7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3aQ8VHT7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3aQ8VHT7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.56□□□□□ -0.56
Gtf3aQ8VHT7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3aQ8VHT7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3aQ8VHT7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3aQ8VHT7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3aQ8VHT7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Gm12390-201ENSMUST00000117897 397 ntBASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Gm43630-201ENSMUST00000201550 776 ntBASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3aQ8VHT7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Gm26315-201ENSMUST00000083890 321 ntBASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Gm6091-201ENSMUST00000098307 165 ntBASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gtf3aQ8VHT7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms