Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Gm12742-201ENSMUST00000117326 410 ntBASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Gm15460-201ENSMUST00000118147 391 ntBASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Gm9229-201ENSMUST00000222777 126 ntBASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps4aQ8VEJ9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps4aQ8VEJ9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Vps4aQ8VEJ9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.96□□□□□ -0.34
Vps4aQ8VEJ9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Vps4aQ8VEJ9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps4aQ8VEJ9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps4aQ8VEJ9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Vps4aQ8VEJ9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps4aQ8VEJ9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Vps4aQ8VEJ9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps4aQ8VEJ9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Vps4aQ8VEJ9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Gm11425-201ENSMUST00000119608 498 ntBASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Gm21470-201ENSMUST00000187680 696 ntBASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Gm9396-201ENSMUST00000076703 567 ntBASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.95□□□□□ -0.34
Vps4aQ8VEJ9 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms