Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.6□□□□□ -0.07
Rpap2Q8VC34 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpap2Q8VC34 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpap2Q8VC34 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rpap2Q8VC34 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpap2Q8VC34 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpap2Q8VC34 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rpap2Q8VC34 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpap2Q8VC34 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpap2Q8VC34 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.6□□□□□ -0.07
Rpap2Q8VC34 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpap2Q8VC34 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Rpap2Q8VC34 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpap2Q8VC34 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpap2Q8VC34 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rpap2Q8VC34 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpap2Q8VC34 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Gm7287-201ENSMUST00000205267 602 ntBASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Rpap2Q8VC34 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rpap2Q8VC34 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Rpap2Q8VC34 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rpap2Q8VC34 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rpap2Q8VC34 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.58□□□□□ -0.07
Rpap2Q8VC34 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.58□□□□□ -0.07
Rpap2Q8VC34 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Rpap2Q8VC34 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Rpap2Q8VC34 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rpap2Q8VC34 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Gm12490-201ENSMUST00000120255 560 ntBASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Gm12138-201ENSMUST00000122180 951 ntBASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Gm19931-201ENSMUST00000198920 368 ntBASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpap2Q8VC34 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Gm14350-201ENSMUST00000116642 640 ntBASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Gm13612-201ENSMUST00000119276 390 ntBASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms