Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Gm11478-201ENSMUST00000117851 599 ntBASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Gm27892-201ENSMUST00000185017 106 ntBASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Gm5356-201ENSMUST00000093326 615 ntBASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sf3a1Q8K4Z5 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sf3a1Q8K4Z5 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sf3a1Q8K4Z5 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sf3a1Q8K4Z5 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Sf3a1Q8K4Z5 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sf3a1Q8K4Z5 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sf3a1Q8K4Z5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sf3a1Q8K4Z5 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Sf3a1Q8K4Z5 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sf3a1Q8K4Z5 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.27■□□□□ 0.19
Sf3a1Q8K4Z5 AC096628.2-201ENSMUST00000225443 1413 ntBASIC16.27■□□□□ 0.19
Sf3a1Q8K4Z5 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sf3a1Q8K4Z5 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Gm13612-201ENSMUST00000119276 390 ntBASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Mir1894-201ENSMUST00000122802 81 ntBASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sf3a1Q8K4Z5 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 Gm6447-201ENSMUST00000118905 835 ntBASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 Gm38671-201ENSMUST00000200573 130 ntBASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sf3a1Q8K4Z5 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms