Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 AC122811.1-201ENSMUST00000222257 2921 ntBASIC8.37□□□□□ -1.07
Cystm1Q8K353 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Gm2810-201ENSMUST00000118681 990 ntBASIC8.37□□□□□ -1.07
Cystm1Q8K353 Gm15593-201ENSMUST00000122085 1008 ntBASIC8.37□□□□□ -1.07
Cystm1Q8K353 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Gm13730-201ENSMUST00000121036 1462 ntBASIC8.37□□□□□ -1.07
Cystm1Q8K353 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cystm1Q8K353 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Gm37849-201ENSMUST00000194722 1881 ntBASIC8.36□□□□□ -1.07
Cystm1Q8K353 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Fgf17-202ENSMUST00000227123 1336 ntBASIC8.36□□□□□ -1.07
Cystm1Q8K353 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cystm1Q8K353 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC8.36□□□□□ -1.07
Cystm1Q8K353 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms