Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim68Q8K243 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim68Q8K243 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim68Q8K243 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim68Q8K243 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trim68Q8K243 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.46□□□□□ -0.1
Trim68Q8K243 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim68Q8K243 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim68Q8K243 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim68Q8K243 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.46□□□□□ -0.1
Trim68Q8K243 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim68Q8K243 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.45□□□□□ -0.1
Trim68Q8K243 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trim68Q8K243 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trim68Q8K243 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Gm1335-201ENSMUST00000121653 386 ntBASIC14.45□□□□□ -0.1
Trim68Q8K243 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trim68Q8K243 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim68Q8K243 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim68Q8K243 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim68Q8K243 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim68Q8K243 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trim68Q8K243 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.45□□□□□ -0.1
Trim68Q8K243 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trim68Q8K243 Mir497b-201ENSMUST00000093601 125 ntBASIC14.45□□□□□ -0.1
Trim68Q8K243 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.45□□□□□ -0.1
Trim68Q8K243 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim68Q8K243 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trim68Q8K243 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Trim68Q8K243 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim68Q8K243 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim68Q8K243 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim68Q8K243 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim68Q8K243 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim68Q8K243 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.44□□□□□ -0.1
Trim68Q8K243 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trim68Q8K243 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim68Q8K243 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim68Q8K243 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim68Q8K243 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim68Q8K243 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim68Q8K243 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim68Q8K243 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim68Q8K243 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim68Q8K243 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim68Q8K243 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim68Q8K243 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim68Q8K243 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim68Q8K243 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim68Q8K243 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim68Q8K243 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim68Q8K243 Gm15808-201ENSMUST00000119046 604 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms