Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Syne4Q8CII8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Gm11930-201ENSMUST00000117788 190 ntBASIC14.97□□□□□ -0.01
Syne4Q8CII8 Gm12217-201ENSMUST00000118858 696 ntBASIC14.97□□□□□ -0.01
Syne4Q8CII8 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Syne4Q8CII8 AA914427-201ENSMUST00000193194 1166 ntBASIC14.97□□□□□ -0.01
Syne4Q8CII8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.97□□□□□ -0.01
Syne4Q8CII8 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Syne4Q8CII8 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.96□□□□□ -0.01
Syne4Q8CII8 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Gm14263-201ENSMUST00000117955 746 ntBASIC14.96□□□□□ -0.01
Syne4Q8CII8 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Mir6927-201ENSMUST00000184494 71 ntBASIC14.96□□□□□ -0.01
Syne4Q8CII8 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.96□□□□□ -0.01
Syne4Q8CII8 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syne4Q8CII8 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syne4Q8CII8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syne4Q8CII8 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Syne4Q8CII8 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.96□□□□□ -0.02
Syne4Q8CII8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Syne4Q8CII8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Syne4Q8CII8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Syne4Q8CII8 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.95□□□□□ -0.02
Syne4Q8CII8 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.95□□□□□ -0.02
Syne4Q8CII8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Snord83b-201ENSMUST00000104546 94 ntBASIC14.95□□□□□ -0.02
Syne4Q8CII8 Gm25214-201ENSMUST00000104573 129 ntBASIC14.95□□□□□ -0.02
Syne4Q8CII8 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.95□□□□□ -0.02
Syne4Q8CII8 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syne4Q8CII8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms