Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.71■□□□□ 0.11
Nup88Q8CEC0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nup88Q8CEC0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nup88Q8CEC0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nup88Q8CEC0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.71■□□□□ 0.11
Nup88Q8CEC0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nup88Q8CEC0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Nup88Q8CEC0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Nup88Q8CEC0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Nup88Q8CEC0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nup88Q8CEC0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nup88Q8CEC0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nup88Q8CEC0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nup88Q8CEC0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nup88Q8CEC0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Nup88Q8CEC0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
Nup88Q8CEC0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nup88Q8CEC0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
Nup88Q8CEC0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nup88Q8CEC0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nup88Q8CEC0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nup88Q8CEC0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Gm18905-201ENSMUST00000205454 928 ntBASIC15.7■□□□□ 0.1
Nup88Q8CEC0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup88Q8CEC0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Gm27892-201ENSMUST00000185017 106 ntBASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup88Q8CEC0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nup88Q8CEC0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms