Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska3Q8C263 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska3Q8C263 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska3Q8C263 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ska3Q8C263 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ska3Q8C263 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ska3Q8C263 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ska3Q8C263 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ska3Q8C263 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska3Q8C263 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ska3Q8C263 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska3Q8C263 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska3Q8C263 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ska3Q8C263 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ska3Q8C263 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska3Q8C263 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ska3Q8C263 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ska3Q8C263 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska3Q8C263 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska3Q8C263 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.53□□□□□ -0.4
Ska3Q8C263 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ska3Q8C263 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ska3Q8C263 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ska3Q8C263 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ska3Q8C263 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ska3Q8C263 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ska3Q8C263 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ska3Q8C263 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.52□□□□□ -0.4
Ska3Q8C263 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.52□□□□□ -0.4
Ska3Q8C263 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Ska3Q8C263 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ska3Q8C263 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.52□□□□□ -0.41
Ska3Q8C263 Gm12490-201ENSMUST00000120255 560 ntBASIC12.52□□□□□ -0.41
Ska3Q8C263 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.52□□□□□ -0.41
Ska3Q8C263 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.52□□□□□ -0.41
Ska3Q8C263 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Gm45384-201ENSMUST00000210451 277 ntBASIC12.52□□□□□ -0.41
Ska3Q8C263 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.52□□□□□ -0.41
Ska3Q8C263 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ska3Q8C263 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ska3Q8C263 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.52□□□□□ -0.41
Ska3Q8C263 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.52□□□□□ -0.41
Ska3Q8C263 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ska3Q8C263 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ska3Q8C263 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ska3Q8C263 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.51□□□□□ -0.41
Ska3Q8C263 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.51□□□□□ -0.41
Ska3Q8C263 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.51□□□□□ -0.41
Ska3Q8C263 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.51□□□□□ -0.41
Ska3Q8C263 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.51□□□□□ -0.41
Ska3Q8C263 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ska3Q8C263 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ska3Q8C263 Gm2495-201ENSMUST00000191160 466 ntBASIC12.51□□□□□ -0.41
Ska3Q8C263 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Gm18041-201ENSMUST00000218210 618 ntBASIC12.51□□□□□ -0.41
Ska3Q8C263 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.51□□□□□ -0.41
Ska3Q8C263 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.51□□□□□ -0.41
Ska3Q8C263 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.51□□□□□ -0.41
Ska3Q8C263 Gm26315-201ENSMUST00000083890 321 ntBASIC12.51□□□□□ -0.41
Ska3Q8C263 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Ska3Q8C263 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Ska3Q8C263 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ska3Q8C263 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.51□□□□□ -0.41
Ska3Q8C263 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ska3Q8C263 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms