Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm45668-201ENSMUST00000211271 493 ntBASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.73□□□□□ -0.21
Trub1Q8C0D0 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trub1Q8C0D0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Gm15429-201ENSMUST00000151268 798 ntBASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trub1Q8C0D0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trub1Q8C0D0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trub1Q8C0D0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trub1Q8C0D0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trub1Q8C0D0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trub1Q8C0D0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trub1Q8C0D0 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trub1Q8C0D0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trub1Q8C0D0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trub1Q8C0D0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trub1Q8C0D0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.71□□□□□ -0.21
Trub1Q8C0D0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trub1Q8C0D0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trub1Q8C0D0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trub1Q8C0D0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trub1Q8C0D0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trub1Q8C0D0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trub1Q8C0D0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trub1Q8C0D0 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trub1Q8C0D0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trub1Q8C0D0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trub1Q8C0D0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Trub1Q8C0D0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trub1Q8C0D0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trub1Q8C0D0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trub1Q8C0D0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.7□□□□□ -0.22
Trub1Q8C0D0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms