Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Mir6956-201ENSMUST00000183598 62 ntBASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Gm15240-201ENSMUST00000118156 720 ntBASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Gm27772-201ENSMUST00000184900 187 ntBASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.86□□□□□ -0.35
Cpne3Q8BT60 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.86□□□□□ -0.35
Cpne3Q8BT60 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpne3Q8BT60 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms