Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Gm15459-201ENSMUST00000117405 1941 ntBASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Gm8355-201ENSMUST00000177767 1941 ntBASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Gm14921-201ENSMUST00000118643 908 ntBASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 AU022133-201ENSMUST00000200601 873 ntBASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Gm44651-201ENSMUST00000207343 372 ntBASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Gm45433-201ENSMUST00000209386 247 ntBASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Gm7848-201ENSMUST00000210739 718 ntBASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Sybu-209ENSMUST00000228639 4113 ntBASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Gm43081-201ENSMUST00000199082 1380 ntBASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Gm44126-201ENSMUST00000204831 514 ntBASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Gm44545-201ENSMUST00000208262 746 ntBASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col16a1Q8BLX7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Gm8566-201ENSMUST00000120174 465 ntBASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Gm45925-201ENSMUST00000218882 744 ntBASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 AC125209.1-201ENSMUST00000225812 766 ntBASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col16a1Q8BLX7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Gm2673-201ENSMUST00000120958 1608 ntBASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms