Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Gm2991-201ENSMUST00000173338 480 ntBASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Gm6621-201ENSMUST00000193251 772 ntBASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Gm25668-201ENSMUST00000157700 129 ntBASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Gm29199-201ENSMUST00000187766 775 ntBASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Gm37042-201ENSMUST00000193816 581 ntBASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcal1Q8BJL0 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Gm15808-201ENSMUST00000119046 604 ntBASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Gm11964-201ENSMUST00000120982 444 ntBASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Gm12363-201ENSMUST00000122250 668 ntBASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Gm11978-201ENSMUST00000122315 466 ntBASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Gm16570-201ENSMUST00000161951 436 ntBASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Gm20482-202ENSMUST00000174729 825 ntBASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcal1Q8BJL0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms