Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Depdc1bQ8BH88 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Depdc1bQ8BH88 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Depdc1bQ8BH88 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Depdc1bQ8BH88 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Depdc1bQ8BH88 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Depdc1bQ8BH88 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Depdc1bQ8BH88 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Depdc1bQ8BH88 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.48□□□□□ -0.09
Depdc1bQ8BH88 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Depdc1bQ8BH88 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Depdc1bQ8BH88 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.48□□□□□ -0.09
Depdc1bQ8BH88 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Depdc1bQ8BH88 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Depdc1bQ8BH88 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Depdc1bQ8BH88 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Gm25857-201ENSMUST00000082788 129 ntBASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Depdc1bQ8BH88 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Gm28911-201ENSMUST00000188837 117 ntBASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Depdc1bQ8BH88 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Depdc1bQ8BH88 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Depdc1bQ8BH88 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.46□□□□□ -0.1
Depdc1bQ8BH88 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Depdc1bQ8BH88 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Depdc1bQ8BH88 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Depdc1bQ8BH88 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Depdc1bQ8BH88 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Depdc1bQ8BH88 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms