Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim50Q810I2 Gm38223-201ENSMUST00000194484 695 ntBASIC12.97□□□□□ -0.33
Trim50Q810I2 Gm42550-201ENSMUST00000201553 960 ntBASIC12.97□□□□□ -0.33
Trim50Q810I2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Trim50Q810I2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim50Q810I2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim50Q810I2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trim50Q810I2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim50Q810I2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim50Q810I2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.96□□□□□ -0.33
Trim50Q810I2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim50Q810I2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim50Q810I2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim50Q810I2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim50Q810I2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim50Q810I2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim50Q810I2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim50Q810I2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim50Q810I2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim50Q810I2 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.96□□□□□ -0.33
Trim50Q810I2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim50Q810I2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim50Q810I2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim50Q810I2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim50Q810I2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim50Q810I2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.96□□□□□ -0.33
Trim50Q810I2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim50Q810I2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trim50Q810I2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim50Q810I2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim50Q810I2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim50Q810I2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim50Q810I2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim50Q810I2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim50Q810I2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim50Q810I2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim50Q810I2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim50Q810I2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.95□□□□□ -0.34
Trim50Q810I2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim50Q810I2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim50Q810I2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim50Q810I2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim50Q810I2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.95□□□□□ -0.34
Trim50Q810I2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim50Q810I2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim50Q810I2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim50Q810I2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Trim50Q810I2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.95□□□□□ -0.34
Trim50Q810I2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.95□□□□□ -0.34
Trim50Q810I2 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.95□□□□□ -0.34
Trim50Q810I2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim50Q810I2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim50Q810I2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim50Q810I2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim50Q810I2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim50Q810I2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim50Q810I2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim50Q810I2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim50Q810I2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim50Q810I2 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim50Q810I2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim50Q810I2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim50Q810I2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim50Q810I2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim50Q810I2 Grk6-205ENSMUST00000224653 2976 ntBASIC12.94□□□□□ -0.34
Trim50Q810I2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim50Q810I2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim50Q810I2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim50Q810I2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim50Q810I2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim50Q810I2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim50Q810I2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms