Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Srrm3Q80WV7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Srrm3Q80WV7 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Srrm3Q80WV7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Srrm3Q80WV7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Srrm3Q80WV7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Srrm3Q80WV7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Srrm3Q80WV7 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Srrm3Q80WV7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Srrm3Q80WV7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Srrm3Q80WV7 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Gm18027-201ENSMUST00000218947 619 ntBASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Gm9063-201ENSMUST00000223299 582 ntBASIC13.89□□□□□ -0.19
Srrm3Q80WV7 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Gm6180-201ENSMUST00000065243 498 ntBASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Srrm3Q80WV7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 AA619741-201ENSMUST00000195095 646 ntBASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Gm6266-201ENSMUST00000203844 806 ntBASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Srrm3Q80WV7 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Mir698-201ENSMUST00000102164 109 ntBASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Gm12138-201ENSMUST00000122180 951 ntBASIC13.87□□□□□ -0.19
Srrm3Q80WV7 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms