Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.35■□□□□ 0.05
Prpf40bQ80W14 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.35■□□□□ 0.05
Prpf40bQ80W14 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.35■□□□□ 0.05
Prpf40bQ80W14 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40bQ80W14 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40bQ80W14 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40bQ80W14 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40bQ80W14 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40bQ80W14 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Prpf40bQ80W14 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40bQ80W14 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40bQ80W14 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40bQ80W14 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40bQ80W14 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Prpf40bQ80W14 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.35■□□□□ 0.05
Prpf40bQ80W14 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Prpf40bQ80W14 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40bQ80W14 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Prpf40bQ80W14 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Gm12997-201ENSMUST00000120207 640 ntBASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Gm27320-201ENSMUST00000184892 109 ntBASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Gm44608-201ENSMUST00000206827 855 ntBASIC15.34■□□□□ 0.05
Prpf40bQ80W14 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Prpf40bQ80W14 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Prpf40bQ80W14 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.33■□□□□ 0.05
Prpf40bQ80W14 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.33■□□□□ 0.04
Prpf40bQ80W14 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Gm2383-201ENSMUST00000181461 807 ntBASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Gm43138-201ENSMUST00000199123 708 ntBASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Snora73a-201ENSMUST00000082453 205 ntBASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Prpf40bQ80W14 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC15.32■□□□□ 0.04
Prpf40bQ80W14 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms