Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Gm15236-201ENSMUST00000117309 379 ntBASIC14.54□□□□□ -0.08
Ush1gQ80T11 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Gm7584-201ENSMUST00000175829 940 ntBASIC14.54□□□□□ -0.08
Ush1gQ80T11 Gm26927-201ENSMUST00000182385 965 ntBASIC14.54□□□□□ -0.08
Ush1gQ80T11 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Mir8109-201ENSMUST00000184375 117 ntBASIC14.54□□□□□ -0.08
Ush1gQ80T11 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Gm37922-201ENSMUST00000195596 455 ntBASIC14.54□□□□□ -0.08
Ush1gQ80T11 Gm16372-201ENSMUST00000073088 450 ntBASIC14.54□□□□□ -0.08
Ush1gQ80T11 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.54□□□□□ -0.08
Ush1gQ80T11 Gm26315-201ENSMUST00000083890 321 ntBASIC14.54□□□□□ -0.08
Ush1gQ80T11 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.54□□□□□ -0.08
Ush1gQ80T11 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ush1gQ80T11 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.53□□□□□ -0.08
Ush1gQ80T11 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.53□□□□□ -0.08
Ush1gQ80T11 Gm22018-201ENSMUST00000104357 131 ntBASIC14.53□□□□□ -0.08
Ush1gQ80T11 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.53□□□□□ -0.08
Ush1gQ80T11 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.53□□□□□ -0.08
Ush1gQ80T11 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.53□□□□□ -0.08
Ush1gQ80T11 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.53□□□□□ -0.08
Ush1gQ80T11 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ush1gQ80T11 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.53□□□□□ -0.08
Ush1gQ80T11 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Ush1gQ80T11 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms