Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Gm43575-201ENSMUST00000196420 516 ntBASIC14.16□□□□□ -0.14
CtifQ6PEE2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CtifQ6PEE2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.15□□□□□ -0.14
CtifQ6PEE2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.15□□□□□ -0.14
CtifQ6PEE2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.15□□□□□ -0.14
CtifQ6PEE2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Mir5131-201ENSMUST00000175426 93 ntBASIC14.15□□□□□ -0.14
CtifQ6PEE2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Gm27300-201ENSMUST00000184085 97 ntBASIC14.15□□□□□ -0.14
CtifQ6PEE2 Gm27335-201ENSMUST00000184758 97 ntBASIC14.15□□□□□ -0.14
CtifQ6PEE2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.15□□□□□ -0.14
CtifQ6PEE2 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.15□□□□□ -0.14
CtifQ6PEE2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CtifQ6PEE2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CtifQ6PEE2 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Gm5264-201ENSMUST00000190584 848 ntBASIC14.14□□□□□ -0.15
CtifQ6PEE2 Gm5364-201ENSMUST00000216789 889 ntBASIC14.14□□□□□ -0.15
CtifQ6PEE2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.14□□□□□ -0.15
CtifQ6PEE2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.14□□□□□ -0.15
CtifQ6PEE2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CtifQ6PEE2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.13□□□□□ -0.15
CtifQ6PEE2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.13□□□□□ -0.15
CtifQ6PEE2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Gm6376-201ENSMUST00000209407 580 ntBASIC14.13□□□□□ -0.15
CtifQ6PEE2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms