Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Gm6992-201ENSMUST00000217973 1607 ntBASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Gm8712-201ENSMUST00000221090 701 ntBASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd4Q6PDQ2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Abhd11os-203ENSMUST00000222613 363 ntBASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chd4Q6PDQ2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 Gm42769-201ENSMUST00000198576 1659 ntBASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 Mir3547-201ENSMUST00000175461 88 ntBASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chd4Q6PDQ2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Gm4909-201ENSMUST00000118749 794 ntBASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Gm13394-201ENSMUST00000121658 1000 ntBASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Gm13097-201ENSMUST00000210722 397 ntBASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd4Q6PDQ2 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms