Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm12314-201ENSMUST00000118104 538 ntBASIC15.72■□□□□ 0.11
Col11a2Q64739 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Col11a2Q64739 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC15.72■□□□□ 0.11
Col11a2Q64739 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.72■□□□□ 0.11
Col11a2Q64739 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Col11a2Q64739 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Col11a2Q64739 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.72■□□□□ 0.11
Col11a2Q64739 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col11a2Q64739 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a2Q64739 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a2Q64739 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a2Q64739 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Col11a2Q64739 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a2Q64739 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC15.71■□□□□ 0.11
Col11a2Q64739 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC15.71■□□□□ 0.11
Col11a2Q64739 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Col11a2Q64739 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a2Q64739 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a2Q64739 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a2Q64739 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a2Q64739 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a2Q64739 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a2Q64739 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a2Q64739 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Col11a2Q64739 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a2Q64739 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a2Q64739 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.71■□□□□ 0.11
Col11a2Q64739 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a2Q64739 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Col11a2Q64739 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a2Q64739 Mup-ps26-201ENSMUST00000121751 202 ntBASIC15.71■□□□□ 0.1
Col11a2Q64739 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
Col11a2Q64739 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a2Q64739 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC15.71■□□□□ 0.1
Col11a2Q64739 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Col11a2Q64739 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a2Q64739 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a2Q64739 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Col11a2Q64739 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a2Q64739 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a2Q64739 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a2Q64739 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a2Q64739 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a2Q64739 Gm42937-201ENSMUST00000197360 752 ntBASIC15.71■□□□□ 0.1
Col11a2Q64739 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.71■□□□□ 0.1
Col11a2Q64739 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Col11a2Q64739 CT009713.8-201ENSMUST00000225448 560 ntBASIC15.71■□□□□ 0.1
Col11a2Q64739 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a2Q64739 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a2Q64739 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a2Q64739 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a2Q64739 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Col11a2Q64739 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a2Q64739 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Col11a2Q64739 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Col11a2Q64739 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a2Q64739 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a2Q64739 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a2Q64739 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a2Q64739 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.7■□□□□ 0.1
Col11a2Q64739 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a2Q64739 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a2Q64739 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a2Q64739 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a2Q64739 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a2Q64739 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a2Q64739 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a2Q64739 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a2Q64739 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a2Q64739 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a2Q64739 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a2Q64739 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a2Q64739 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a2Q64739 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a2Q64739 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a2Q64739 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.7■□□□□ 0.1
Col11a2Q64739 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC15.7■□□□□ 0.1
Col11a2Q64739 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.7■□□□□ 0.1
Col11a2Q64739 Gm13888-201ENSMUST00000119148 422 ntBASIC15.7■□□□□ 0.1
Col11a2Q64739 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC15.7■□□□□ 0.1
Col11a2Q64739 Gm37905-201ENSMUST00000195310 341 ntBASIC15.7■□□□□ 0.1
Col11a2Q64739 Gm17827-201ENSMUST00000211825 742 ntBASIC15.7■□□□□ 0.1
Col11a2Q64739 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms