Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.24□□□□□ -0.77
Notch3Q61982 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Notch3Q61982 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.24□□□□□ -0.77
Notch3Q61982 Gm27331-201ENSMUST00000183705 60 ntBASIC10.24□□□□□ -0.77
Notch3Q61982 Gm27682-201ENSMUST00000183930 110 ntBASIC10.24□□□□□ -0.77
Notch3Q61982 Gm27516-201ENSMUST00000184237 98 ntBASIC10.24□□□□□ -0.77
Notch3Q61982 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.24□□□□□ -0.77
Notch3Q61982 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Mir497b-201ENSMUST00000093601 125 ntBASIC10.24□□□□□ -0.77
Notch3Q61982 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.24□□□□□ -0.77
Notch3Q61982 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.24□□□□□ -0.77
Notch3Q61982 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Notch3Q61982 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Notch3Q61982 Gm9109-201ENSMUST00000120254 1405 ntBASIC10.24□□□□□ -0.77
Notch3Q61982 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.23□□□□□ -0.77
Notch3Q61982 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Notch3Q61982 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.23□□□□□ -0.77
Notch3Q61982 Gm7584-201ENSMUST00000175829 940 ntBASIC10.23□□□□□ -0.77
Notch3Q61982 Gm5069-202ENSMUST00000192714 1011 ntBASIC10.23□□□□□ -0.77
Notch3Q61982 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Gm19184-201ENSMUST00000196798 928 ntBASIC10.23□□□□□ -0.77
Notch3Q61982 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.23□□□□□ -0.77
Notch3Q61982 Gm38671-201ENSMUST00000200573 130 ntBASIC10.23□□□□□ -0.77
Notch3Q61982 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Notch3Q61982 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Notch3Q61982 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Notch3Q61982 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.23□□□□□ -0.77
Notch3Q61982 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.23□□□□□ -0.77
Notch3Q61982 Gm6013-201ENSMUST00000212264 699 ntBASIC10.23□□□□□ -0.77
Notch3Q61982 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.23□□□□□ -0.77
Notch3Q61982 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.23□□□□□ -0.77
Notch3Q61982 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Notch3Q61982 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Notch3Q61982 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.22□□□□□ -0.77
Notch3Q61982 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Notch3Q61982 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.22□□□□□ -0.77
Notch3Q61982 Mir5132-201ENSMUST00000175166 71 ntBASIC10.22□□□□□ -0.77
Notch3Q61982 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.22□□□□□ -0.77
Notch3Q61982 Gm27772-201ENSMUST00000184900 187 ntBASIC10.22□□□□□ -0.77
Notch3Q61982 Gm4971-201ENSMUST00000205991 1108 ntBASIC10.22□□□□□ -0.77
Notch3Q61982 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.22□□□□□ -0.77
Notch3Q61982 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Notch3Q61982 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Notch3Q61982 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms