Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm18463-201ENSMUST00000207258 474 ntBASIC17.45■□□□□ 0.38
Gli3Q61602 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC17.45■□□□□ 0.38
Gli3Q61602 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Gli3Q61602 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC17.45■□□□□ 0.38
Gli3Q61602 Arhgef33-210ENSMUST00000225548 456 ntBASIC17.45■□□□□ 0.38
Gli3Q61602 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gli3Q61602 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gli3Q61602 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Gli3Q61602 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gli3Q61602 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gli3Q61602 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gli3Q61602 Gm18626-201ENSMUST00000221512 1409 ntBASIC17.44■□□□□ 0.38
Gli3Q61602 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gli3Q61602 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gli3Q61602 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gli3Q61602 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gli3Q61602 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC17.44■□□□□ 0.38
Gli3Q61602 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gli3Q61602 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Gli3Q61602 Gm14274-201ENSMUST00000117182 615 ntBASIC17.44■□□□□ 0.38
Gli3Q61602 Gm11989-201ENSMUST00000117240 672 ntBASIC17.44■□□□□ 0.38
Gli3Q61602 Gm12314-201ENSMUST00000118104 538 ntBASIC17.44■□□□□ 0.38
Gli3Q61602 Gm11362-201ENSMUST00000118838 850 ntBASIC17.44■□□□□ 0.38
Gli3Q61602 Gm14585-201ENSMUST00000120713 634 ntBASIC17.44■□□□□ 0.38
Gli3Q61602 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC17.44■□□□□ 0.38
Gli3Q61602 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC17.44■□□□□ 0.38
Gli3Q61602 Gm27910-201ENSMUST00000185004 107 ntBASIC17.44■□□□□ 0.38
Gli3Q61602 Gm5100-201ENSMUST00000195631 589 ntBASIC17.44■□□□□ 0.38
Gli3Q61602 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gli3Q61602 AC154252.2-201ENSMUST00000223593 767 ntBASIC17.44■□□□□ 0.38
Gli3Q61602 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gli3Q61602 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.44■□□□□ 0.38
Gli3Q61602 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gli3Q61602 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gli3Q61602 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Gli3Q61602 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gli3Q61602 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Gli3Q61602 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gli3Q61602 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC17.43■□□□□ 0.38
Gli3Q61602 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gli3Q61602 Gm42937-201ENSMUST00000197360 752 ntBASIC17.43■□□□□ 0.38
Gli3Q61602 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC17.43■□□□□ 0.38
Gli3Q61602 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC17.43■□□□□ 0.38
Gli3Q61602 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gli3Q61602 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gli3Q61602 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gli3Q61602 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gli3Q61602 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gli3Q61602 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gli3Q61602 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gli3Q61602 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gli3Q61602 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gli3Q61602 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Gli3Q61602 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Gli3Q61602 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.42■□□□□ 0.38
Gli3Q61602 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Gli3Q61602 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 Gm9361-201ENSMUST00000198695 1507 ntBASIC17.42■□□□□ 0.38
Gli3Q61602 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC17.42■□□□□ 0.38
Gli3Q61602 Gm13022-201ENSMUST00000121181 285 ntBASIC17.42■□□□□ 0.38
Gli3Q61602 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC17.42■□□□□ 0.38
Gli3Q61602 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC17.42■□□□□ 0.38
Gli3Q61602 Gm3332-201ENSMUST00000189337 928 ntBASIC17.42■□□□□ 0.38
Gli3Q61602 Gm18059-201ENSMUST00000208073 580 ntBASIC17.42■□□□□ 0.38
Gli3Q61602 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.42■□□□□ 0.38
Gli3Q61602 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli3Q61602 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.42■□□□□ 0.38
Gli3Q61602 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.42■□□□□ 0.38
Gli3Q61602 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Gli3Q61602 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli3Q61602 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli3Q61602 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Gli3Q61602 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC17.41■□□□□ 0.38
Gli3Q61602 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gli3Q61602 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli3Q61602 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli3Q61602 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli3Q61602 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli3Q61602 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli3Q61602 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli3Q61602 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Gli3Q61602 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.41■□□□□ 0.38
Gli3Q61602 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli3Q61602 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms