Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 CT009713.10-201ENSMUST00000225013 1986 ntBASIC17.2■□□□□ 0.34
Ccne1Q61457 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccne1Q61457 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccne1Q61457 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccne1Q61457 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccne1Q61457 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccne1Q61457 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccne1Q61457 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccne1Q61457 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccne1Q61457 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ccne1Q61457 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccne1Q61457 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC17.2■□□□□ 0.34
Ccne1Q61457 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccne1Q61457 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccne1Q61457 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccne1Q61457 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Ccne1Q61457 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccne1Q61457 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ccne1Q61457 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccne1Q61457 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ccne1Q61457 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccne1Q61457 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccne1Q61457 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccne1Q61457 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.2■□□□□ 0.34
Ccne1Q61457 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccne1Q61457 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccne1Q61457 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccne1Q61457 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccne1Q61457 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccne1Q61457 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccne1Q61457 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccne1Q61457 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccne1Q61457 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ccne1Q61457 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ccne1Q61457 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ccne1Q61457 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Ccne1Q61457 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Ccne1Q61457 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Ccne1Q61457 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Gm25668-201ENSMUST00000157700 129 ntBASIC17.19■□□□□ 0.34
Ccne1Q61457 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Gm22121-201ENSMUST00000175148 54 ntBASIC17.19■□□□□ 0.34
Ccne1Q61457 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Gm8176-201ENSMUST00000191297 1099 ntBASIC17.19■□□□□ 0.34
Ccne1Q61457 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Mir433-201ENSMUST00000093564 124 ntBASIC17.19■□□□□ 0.34
Ccne1Q61457 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ccne1Q61457 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ccne1Q61457 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Ccne1Q61457 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccne1Q61457 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccne1Q61457 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccne1Q61457 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ccne1Q61457 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC17.18■□□□□ 0.34
Ccne1Q61457 Gm4782-201ENSMUST00000168705 2046 ntBASIC17.18■□□□□ 0.34
Ccne1Q61457 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ccne1Q61457 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ccne1Q61457 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccne1Q61457 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC17.18■□□□□ 0.34
Ccne1Q61457 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccne1Q61457 Gm11222-201ENSMUST00000119005 738 ntBASIC17.18■□□□□ 0.34
Ccne1Q61457 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ccne1Q61457 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC17.18■□□□□ 0.34
Ccne1Q61457 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC17.18■□□□□ 0.34
Ccne1Q61457 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccne1Q61457 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC17.18■□□□□ 0.34
Ccne1Q61457 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC17.18■□□□□ 0.34
Ccne1Q61457 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ccne1Q61457 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ccne1Q61457 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ccne1Q61457 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccne1Q61457 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccne1Q61457 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ccne1Q61457 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccne1Q61457 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC17.18■□□□□ 0.34
Ccne1Q61457 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccne1Q61457 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC17.18■□□□□ 0.34
Ccne1Q61457 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccne1Q61457 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccne1Q61457 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccne1Q61457 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ccne1Q61457 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccne1Q61457 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccne1Q61457 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccne1Q61457 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccne1Q61457 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms