Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.99□□□□□ -0.33
Vsx2Q61412 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Vsx2Q61412 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vsx2Q61412 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.99□□□□□ -0.33
Vsx2Q61412 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vsx2Q61412 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Vsx2Q61412 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Vsx2Q61412 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vsx2Q61412 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Gm12138-201ENSMUST00000122180 951 ntBASIC12.98□□□□□ -0.33
Vsx2Q61412 Gm15376-201ENSMUST00000122258 783 ntBASIC12.98□□□□□ -0.33
Vsx2Q61412 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.98□□□□□ -0.33
Vsx2Q61412 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vsx2Q61412 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.98□□□□□ -0.33
Vsx2Q61412 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.98□□□□□ -0.33
Vsx2Q61412 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.98□□□□□ -0.33
Vsx2Q61412 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vsx2Q61412 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx2Q61412 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.97□□□□□ -0.33
Vsx2Q61412 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Vsx2Q61412 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Vsx2Q61412 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.97□□□□□ -0.33
Vsx2Q61412 Gm11918-201ENSMUST00000121660 179 ntBASIC12.97□□□□□ -0.33
Vsx2Q61412 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.97□□□□□ -0.33
Vsx2Q61412 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Mir7654-201ENSMUST00000185082 70 ntBASIC12.97□□□□□ -0.33
Vsx2Q61412 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.97□□□□□ -0.33
Vsx2Q61412 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.97□□□□□ -0.33
Vsx2Q61412 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.97□□□□□ -0.33
Vsx2Q61412 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.97□□□□□ -0.33
Vsx2Q61412 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.97□□□□□ -0.33
Vsx2Q61412 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.97□□□□□ -0.33
Vsx2Q61412 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vsx2Q61412 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.97□□□□□ -0.33
Vsx2Q61412 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.97□□□□□ -0.33
Vsx2Q61412 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.97□□□□□ -0.33
Vsx2Q61412 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Vsx2Q61412 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Vsx2Q61412 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.97□□□□□ -0.33
Vsx2Q61412 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vsx2Q61412 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms