Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.57□□□□□ -0.08
Col11a1Q61245 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a1Q61245 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a1Q61245 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a1Q61245 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a1Q61245 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a1Q61245 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.57□□□□□ -0.08
Col11a1Q61245 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.57□□□□□ -0.08
Col11a1Q61245 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a1Q61245 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a1Q61245 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Col11a1Q61245 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Col11a1Q61245 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Col11a1Q61245 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC14.57□□□□□ -0.08
Col11a1Q61245 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.57□□□□□ -0.08
Col11a1Q61245 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a1Q61245 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14.57□□□□□ -0.08
Col11a1Q61245 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14.57□□□□□ -0.08
Col11a1Q61245 Gm19931-201ENSMUST00000198920 368 ntBASIC14.57□□□□□ -0.08
Col11a1Q61245 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.57□□□□□ -0.08
Col11a1Q61245 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a1Q61245 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a1Q61245 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a1Q61245 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
Col11a1Q61245 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Col11a1Q61245 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Col11a1Q61245 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a1Q61245 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a1Q61245 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a1Q61245 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a1Q61245 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a1Q61245 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a1Q61245 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.56□□□□□ -0.08
Col11a1Q61245 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a1Q61245 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a1Q61245 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.56□□□□□ -0.08
Col11a1Q61245 Gm9062-201ENSMUST00000117712 727 ntBASIC14.56□□□□□ -0.08
Col11a1Q61245 Gm11941-201ENSMUST00000119904 610 ntBASIC14.56□□□□□ -0.08
Col11a1Q61245 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Col11a1Q61245 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.56□□□□□ -0.08
Col11a1Q61245 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a1Q61245 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Col11a1Q61245 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.56□□□□□ -0.08
Col11a1Q61245 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.56□□□□□ -0.08
Col11a1Q61245 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a1Q61245 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a1Q61245 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Col11a1Q61245 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a1Q61245 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a1Q61245 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a1Q61245 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Col11a1Q61245 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a1Q61245 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Col11a1Q61245 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a1Q61245 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a1Q61245 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Col11a1Q61245 Gm13888-201ENSMUST00000119148 422 ntBASIC14.55□□□□□ -0.08
Col11a1Q61245 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Gm14999-201ENSMUST00000121039 624 ntBASIC14.55□□□□□ -0.08
Col11a1Q61245 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.55□□□□□ -0.08
Col11a1Q61245 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.55□□□□□ -0.08
Col11a1Q61245 Gm43962-201ENSMUST00000203898 190 ntBASIC14.55□□□□□ -0.08
Col11a1Q61245 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col11a1Q61245 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Col11a1Q61245 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.55□□□□□ -0.08
Col11a1Q61245 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.55□□□□□ -0.08
Col11a1Q61245 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.55□□□□□ -0.08
Col11a1Q61245 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col11a1Q61245 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col11a1Q61245 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Col11a1Q61245 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.55□□□□□ -0.08
Col11a1Q61245 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.55□□□□□ -0.08
Col11a1Q61245 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.55□□□□□ -0.08
Col11a1Q61245 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.55□□□□□ -0.08
Col11a1Q61245 Gm17827-201ENSMUST00000211825 742 ntBASIC14.55□□□□□ -0.08
Col11a1Q61245 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.55□□□□□ -0.08
Col11a1Q61245 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Col11a1Q61245 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms