Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Gm28659-201ENSMUST00000188013 759 ntBASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Gm9449-201ENSMUST00000207265 1011 ntBASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Gm11873-201ENSMUST00000117877 1304 ntBASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Daam2-202ENSMUST00000224595 1926 ntBASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Gm43935-201ENSMUST00000203569 1050 ntBASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 AC147366.1-201ENSMUST00000227671 852 ntBASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-3Q5R1C3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-3Q5R1C3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-3Q5R1C3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-3Q5R1C3 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.96□□□□□ -0.81
Trav3-3Q5R1C3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-3Q5R1C3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-3Q5R1C3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-3Q5R1C3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-3Q5R1C3 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-3Q5R1C3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-3Q5R1C3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms