Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Gm6222-202ENSMUST00000182143 629 ntBASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Gm37008-201ENSMUST00000195712 319 ntBASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Gm44882-201ENSMUST00000205702 802 ntBASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rc3h1Q4VGL6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rc3h1Q4VGL6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Rc3h1Q4VGL6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rc3h1Q4VGL6 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rc3h1Q4VGL6 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rc3h1Q4VGL6 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Gm25927-201ENSMUST00000175058 117 ntBASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Gm28693-202ENSMUST00000190758 331 ntBASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rc3h1Q4VGL6 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms