Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Paupar-201ENSMUST00000194826 3482 ntBASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.46□□□□□ -0.41
Trim40Q3UWA4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Gm11745-201ENSMUST00000121669 448 ntBASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Gm18049-201ENSMUST00000208909 581 ntBASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Mir125a-201ENSMUST00000083545 68 ntBASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim40Q3UWA4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Trim40Q3UWA4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim40Q3UWA4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim40Q3UWA4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim40Q3UWA4 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim40Q3UWA4 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim40Q3UWA4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim40Q3UWA4 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.46□□□□□ -0.42
Trim40Q3UWA4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim40Q3UWA4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim40Q3UWA4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Mir1895-201ENSMUST00000122615 79 ntBASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Gm27494-201ENSMUST00000184735 189 ntBASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Gm45453-201ENSMUST00000211758 853 ntBASIC12.45□□□□□ -0.42
Trim40Q3UWA4 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Gm10175-201ENSMUST00000086013 645 ntBASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim40Q3UWA4 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim40Q3UWA4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim40Q3UWA4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim40Q3UWA4 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim40Q3UWA4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim40Q3UWA4 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim40Q3UWA4 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms