Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Gm13996-201ENSMUST00000118456 430 ntBASIC13.31□□□□□ -0.28
Fam196aQ3USH1 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Gm23699-201ENSMUST00000158835 135 ntBASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fam196aQ3USH1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Gm9062-201ENSMUST00000117712 727 ntBASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Gm19459-201ENSMUST00000176240 835 ntBASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Gm44651-201ENSMUST00000207343 372 ntBASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Gm32025-201ENSMUST00000217960 307 ntBASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.3□□□□□ -0.28
Fam196aQ3USH1 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fam196aQ3USH1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms