Protein–RNA interactions for Protein: Q04519

Smpd1, Sphingomyelin phosphodiesterase, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd1Q04519 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.2□□□□□ -0.14
Smpd1Q04519 Gm9257-201ENSMUST00000221254 232 ntBASIC14.2□□□□□ -0.14
Smpd1Q04519 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smpd1Q04519 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Smpd1Q04519 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.19□□□□□ -0.14
Smpd1Q04519 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Smpd1Q04519 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Smpd1Q04519 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.19□□□□□ -0.14
Smpd1Q04519 Gm11793-201ENSMUST00000120433 981 ntBASIC14.19□□□□□ -0.14
Smpd1Q04519 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.19□□□□□ -0.14
Smpd1Q04519 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.19□□□□□ -0.14
Smpd1Q04519 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.19□□□□□ -0.14
Smpd1Q04519 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.19□□□□□ -0.14
Smpd1Q04519 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC14.19□□□□□ -0.14
Smpd1Q04519 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC14.19□□□□□ -0.14
Smpd1Q04519 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC14.19□□□□□ -0.14
Smpd1Q04519 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Gm24526-201ENSMUST00000082921 158 ntBASIC14.19□□□□□ -0.14
Smpd1Q04519 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smpd1Q04519 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.19□□□□□ -0.14
Smpd1Q04519 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smpd1Q04519 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smpd1Q04519 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smpd1Q04519 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smpd1Q04519 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smpd1Q04519 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smpd1Q04519 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smpd1Q04519 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.18□□□□□ -0.14
Smpd1Q04519 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smpd1Q04519 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smpd1Q04519 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smpd1Q04519 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smpd1Q04519 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smpd1Q04519 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smpd1Q04519 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Smpd1Q04519 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smpd1Q04519 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC14.18□□□□□ -0.14
Smpd1Q04519 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.18□□□□□ -0.14
Smpd1Q04519 Gm11591-201ENSMUST00000120063 702 ntBASIC14.18□□□□□ -0.14
Smpd1Q04519 Gm16479-201ENSMUST00000121706 932 ntBASIC14.18□□□□□ -0.14
Smpd1Q04519 Gm2231-201ENSMUST00000125661 612 ntBASIC14.18□□□□□ -0.14
Smpd1Q04519 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smpd1Q04519 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smpd1Q04519 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.18□□□□□ -0.14
Smpd1Q04519 Gm17983-201ENSMUST00000190766 594 ntBASIC14.18□□□□□ -0.14
Smpd1Q04519 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.18□□□□□ -0.14
Smpd1Q04519 Gm37684-201ENSMUST00000192779 355 ntBASIC14.18□□□□□ -0.14
Smpd1Q04519 Gm38158-201ENSMUST00000194617 339 ntBASIC14.18□□□□□ -0.14
Smpd1Q04519 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC14.18□□□□□ -0.14
Smpd1Q04519 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.18□□□□□ -0.14
Smpd1Q04519 AC172027.1-201ENSMUST00000217659 337 ntBASIC14.18□□□□□ -0.14
Smpd1Q04519 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.18□□□□□ -0.14
Smpd1Q04519 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.18□□□□□ -0.14
Smpd1Q04519 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms