Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcaP82350 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcaP82350 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcaP82350 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
SgcaP82350 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SgcaP82350 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SgcaP82350 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.15□□□□□ -0.62
SgcaP82350 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SgcaP82350 Gm18733-201ENSMUST00000173950 856 ntBASIC11.15□□□□□ -0.62
SgcaP82350 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcaP82350 AA619741-201ENSMUST00000195095 646 ntBASIC11.15□□□□□ -0.62
SgcaP82350 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcaP82350 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcaP82350 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcaP82350 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcaP82350 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
SgcaP82350 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcaP82350 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
SgcaP82350 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
SgcaP82350 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcaP82350 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcaP82350 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.15□□□□□ -0.62
SgcaP82350 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcaP82350 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SgcaP82350 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
SgcaP82350 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
SgcaP82350 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SgcaP82350 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SgcaP82350 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
SgcaP82350 BC001981-202ENSMUST00000191393 1545 ntBASIC11.14□□□□□ -0.63
SgcaP82350 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SgcaP82350 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.14□□□□□ -0.63
SgcaP82350 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.14□□□□□ -0.63
SgcaP82350 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.14□□□□□ -0.63
SgcaP82350 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.14□□□□□ -0.63
SgcaP82350 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.14□□□□□ -0.63
SgcaP82350 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
SgcaP82350 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.14□□□□□ -0.63
SgcaP82350 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.14□□□□□ -0.63
SgcaP82350 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.14□□□□□ -0.63
SgcaP82350 Mzt1-203ENSMUST00000227948 952 ntBASIC11.14□□□□□ -0.63
SgcaP82350 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.14□□□□□ -0.63
SgcaP82350 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
SgcaP82350 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
SgcaP82350 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
SgcaP82350 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SgcaP82350 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.14□□□□□ -0.63
SgcaP82350 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
SgcaP82350 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SgcaP82350 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.14□□□□□ -0.63
SgcaP82350 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.14□□□□□ -0.63
SgcaP82350 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcaP82350 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.13□□□□□ -0.63
SgcaP82350 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.13□□□□□ -0.63
SgcaP82350 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
SgcaP82350 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
SgcaP82350 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SgcaP82350 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.13□□□□□ -0.63
SgcaP82350 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.13□□□□□ -0.63
SgcaP82350 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.13□□□□□ -0.63
SgcaP82350 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.13□□□□□ -0.63
SgcaP82350 Gm37714-201ENSMUST00000194742 342 ntBASIC11.13□□□□□ -0.63
SgcaP82350 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.13□□□□□ -0.63
SgcaP82350 Gm6443-201ENSMUST00000203599 874 ntBASIC11.13□□□□□ -0.63
SgcaP82350 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms