Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six5P70178 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six5P70178 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Six5P70178 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six5P70178 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six5P70178 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Six5P70178 Gm5687-201ENSMUST00000118252 640 ntBASIC12.46□□□□□ -0.41
Six5P70178 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.46□□□□□ -0.41
Six5P70178 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.46□□□□□ -0.41
Six5P70178 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.46□□□□□ -0.41
Six5P70178 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.46□□□□□ -0.41
Six5P70178 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.46□□□□□ -0.41
Six5P70178 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.46□□□□□ -0.41
Six5P70178 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.46□□□□□ -0.41
Six5P70178 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Six5P70178 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six5P70178 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six5P70178 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six5P70178 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six5P70178 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Six5P70178 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Six5P70178 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Six5P70178 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Six5P70178 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Six5P70178 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Six5P70178 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Six5P70178 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Six5P70178 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Six5P70178 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Six5P70178 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.46□□□□□ -0.42
Six5P70178 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.46□□□□□ -0.42
Six5P70178 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.45□□□□□ -0.42
Six5P70178 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.45□□□□□ -0.42
Six5P70178 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Six5P70178 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.45□□□□□ -0.42
Six5P70178 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.45□□□□□ -0.42
Six5P70178 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Six5P70178 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Six5P70178 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.45□□□□□ -0.42
Six5P70178 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.45□□□□□ -0.42
Six5P70178 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.45□□□□□ -0.42
Six5P70178 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.45□□□□□ -0.42
Six5P70178 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.45□□□□□ -0.42
Six5P70178 Gm2495-201ENSMUST00000191160 466 ntBASIC12.45□□□□□ -0.42
Six5P70178 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.45□□□□□ -0.42
Six5P70178 Gm18473-201ENSMUST00000220543 868 ntBASIC12.45□□□□□ -0.42
Six5P70178 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Six5P70178 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Six5P70178 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Six5P70178 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.45□□□□□ -0.42
Six5P70178 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six5P70178 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.44□□□□□ -0.42
Six5P70178 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Six5P70178 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Six5P70178 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Six5P70178 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Six5P70178 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.44□□□□□ -0.42
Six5P70178 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.44□□□□□ -0.42
Six5P70178 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.44□□□□□ -0.42
Six5P70178 Gm28911-201ENSMUST00000188837 117 ntBASIC12.44□□□□□ -0.42
Six5P70178 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Six5P70178 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Six5P70178 Gm6180-201ENSMUST00000065243 498 ntBASIC12.44□□□□□ -0.42
Six5P70178 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Six5P70178 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Six5P70178 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms