Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm27838-201ENSMUST00000184829 128 ntBASIC14.68□□□□□ -0.06
Hmgb1P63158 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb1P63158 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.68□□□□□ -0.06
Hmgb1P63158 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.68□□□□□ -0.06
Hmgb1P63158 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.68□□□□□ -0.06
Hmgb1P63158 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.68□□□□□ -0.06
Hmgb1P63158 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb1P63158 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.68□□□□□ -0.06
Hmgb1P63158 Gm20445-201ENSMUST00000061905 565 ntBASIC14.68□□□□□ -0.06
Hmgb1P63158 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb1P63158 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Hmgb1P63158 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.68□□□□□ -0.06
Hmgb1P63158 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Hmgb1P63158 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb1P63158 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.68□□□□□ -0.06
Hmgb1P63158 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb1P63158 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb1P63158 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb1P63158 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb1P63158 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb1P63158 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb1P63158 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb1P63158 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.67□□□□□ -0.06
Hmgb1P63158 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Hmgb1P63158 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.67□□□□□ -0.06
Hmgb1P63158 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Hmgb1P63158 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.67□□□□□ -0.06
Hmgb1P63158 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.67□□□□□ -0.06
Hmgb1P63158 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.67□□□□□ -0.06
Hmgb1P63158 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.67□□□□□ -0.06
Hmgb1P63158 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.67□□□□□ -0.06
Hmgb1P63158 Mir6956-201ENSMUST00000183598 62 ntBASIC14.67□□□□□ -0.06
Hmgb1P63158 Mir7684-201ENSMUST00000183858 60 ntBASIC14.67□□□□□ -0.06
Hmgb1P63158 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.67□□□□□ -0.06
Hmgb1P63158 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.67□□□□□ -0.06
Hmgb1P63158 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Hmgb1P63158 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.67□□□□□ -0.06
Hmgb1P63158 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmgb1P63158 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Hmgb1P63158 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Hmgb1P63158 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.66□□□□□ -0.06
Hmgb1P63158 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.66□□□□□ -0.06
Hmgb1P63158 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Hmgb1P63158 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.66□□□□□ -0.06
Hmgb1P63158 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hmgb1P63158 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hmgb1P63158 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Hmgb1P63158 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 Gm43094-201ENSMUST00000196549 921 ntBASIC14.66□□□□□ -0.06
Hmgb1P63158 Gm5279-201ENSMUST00000199575 745 ntBASIC14.66□□□□□ -0.06
Hmgb1P63158 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.66□□□□□ -0.06
Hmgb1P63158 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Hmgb1P63158 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmgb1P63158 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmgb1P63158 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Hmgb1P63158 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hmgb1P63158 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmgb1P63158 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmgb1P63158 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmgb1P63158 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Hmgb1P63158 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmgb1P63158 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmgb1P63158 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms