Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.06□□□□□ -0.32
Lhx1P63006 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.06□□□□□ -0.32
Lhx1P63006 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Lhx1P63006 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.06□□□□□ -0.32
Lhx1P63006 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Lhx1P63006 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.06□□□□□ -0.32
Lhx1P63006 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.06□□□□□ -0.32
Lhx1P63006 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.06□□□□□ -0.32
Lhx1P63006 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx1P63006 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx1P63006 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx1P63006 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx1P63006 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.05□□□□□ -0.32
Lhx1P63006 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx1P63006 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx1P63006 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.05□□□□□ -0.32
Lhx1P63006 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Lhx1P63006 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.05□□□□□ -0.32
Lhx1P63006 Gm13369-201ENSMUST00000119442 987 ntBASIC13.05□□□□□ -0.32
Lhx1P63006 Gm16177-201ENSMUST00000120728 718 ntBASIC13.05□□□□□ -0.32
Lhx1P63006 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.05□□□□□ -0.32
Lhx1P63006 Gm2231-201ENSMUST00000125661 612 ntBASIC13.05□□□□□ -0.32
Lhx1P63006 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx1P63006 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx1P63006 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.05□□□□□ -0.32
Lhx1P63006 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx1P63006 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.05□□□□□ -0.32
Lhx1P63006 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.05□□□□□ -0.32
Lhx1P63006 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.05□□□□□ -0.32
Lhx1P63006 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Lhx1P63006 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx1P63006 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx1P63006 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Lhx1P63006 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx1P63006 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx1P63006 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Lhx1P63006 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx1P63006 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx1P63006 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx1P63006 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Lhx1P63006 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.04□□□□□ -0.32
Lhx1P63006 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.04□□□□□ -0.32
Lhx1P63006 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.04□□□□□ -0.32
Lhx1P63006 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
Lhx1P63006 Mir7221-201ENSMUST00000184009 72 ntBASIC13.04□□□□□ -0.32
Lhx1P63006 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lhx1P63006 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.04□□□□□ -0.32
Lhx1P63006 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Lhx1P63006 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.04□□□□□ -0.32
Lhx1P63006 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.04□□□□□ -0.32
Lhx1P63006 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lhx1P63006 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.04□□□□□ -0.32
Lhx1P63006 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lhx1P63006 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Lhx1P63006 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.04□□□□□ -0.32
Lhx1P63006 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lhx1P63006 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx1P63006 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Lhx1P63006 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lhx1P63006 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lhx1P63006 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.03□□□□□ -0.32
Lhx1P63006 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 113.9 ms