Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sf3b6P59708 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sf3b6P59708 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Sf3b6P59708 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sf3b6P59708 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Sf3b6P59708 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Sf3b6P59708 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Sf3b6P59708 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sf3b6P59708 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.82□□□□□ -0.52
Sf3b6P59708 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Sf3b6P59708 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.82□□□□□ -0.52
Sf3b6P59708 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.82□□□□□ -0.52
Sf3b6P59708 Gm13616-201ENSMUST00000120600 222 ntBASIC11.82□□□□□ -0.52
Sf3b6P59708 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.82□□□□□ -0.52
Sf3b6P59708 Gm18766-201ENSMUST00000189811 808 ntBASIC11.82□□□□□ -0.52
Sf3b6P59708 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.82□□□□□ -0.52
Sf3b6P59708 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Sf3b6P59708 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.82□□□□□ -0.52
Sf3b6P59708 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.82□□□□□ -0.52
Sf3b6P59708 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.82□□□□□ -0.52
Sf3b6P59708 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3b6P59708 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.82□□□□□ -0.52
Sf3b6P59708 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sf3b6P59708 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.81□□□□□ -0.52
Sf3b6P59708 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Sf3b6P59708 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.81□□□□□ -0.52
Sf3b6P59708 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.81□□□□□ -0.52
Sf3b6P59708 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.81□□□□□ -0.52
Sf3b6P59708 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.81□□□□□ -0.52
Sf3b6P59708 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.81□□□□□ -0.52
Sf3b6P59708 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.81□□□□□ -0.52
Sf3b6P59708 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.81□□□□□ -0.52
Sf3b6P59708 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Sf3b6P59708 Gm21470-201ENSMUST00000187680 696 ntBASIC11.81□□□□□ -0.52
Sf3b6P59708 Gm33320-201ENSMUST00000192232 530 ntBASIC11.81□□□□□ -0.52
Sf3b6P59708 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.81□□□□□ -0.52
Sf3b6P59708 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sf3b6P59708 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sf3b6P59708 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Sf3b6P59708 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3b6P59708 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.81□□□□□ -0.52
Sf3b6P59708 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sf3b6P59708 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sf3b6P59708 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.8□□□□□ -0.52
Sf3b6P59708 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Sf3b6P59708 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sf3b6P59708 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.8□□□□□ -0.52
Sf3b6P59708 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.8□□□□□ -0.52
Sf3b6P59708 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sf3b6P59708 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sf3b6P59708 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms