Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Mir7070-201ENSMUST00000183657 86 ntBASIC12.77□□□□□ -0.37
Sox3P53784 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Sox3P53784 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox3P53784 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Sox3P53784 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.77□□□□□ -0.37
Sox3P53784 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox3P53784 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.77□□□□□ -0.37
Sox3P53784 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox3P53784 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox3P53784 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox3P53784 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox3P53784 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox3P53784 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox3P53784 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox3P53784 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox3P53784 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox3P53784 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox3P53784 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox3P53784 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox3P53784 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox3P53784 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox3P53784 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox3P53784 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Sox3P53784 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox3P53784 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Sox3P53784 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.76□□□□□ -0.37
Sox3P53784 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Sox3P53784 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.76□□□□□ -0.37
Sox3P53784 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Sox3P53784 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.76□□□□□ -0.37
Sox3P53784 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.76□□□□□ -0.37
Sox3P53784 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Gm27501-201ENSMUST00000183599 107 ntBASIC12.76□□□□□ -0.37
Sox3P53784 Gm27516-201ENSMUST00000184237 98 ntBASIC12.76□□□□□ -0.37
Sox3P53784 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.76□□□□□ -0.37
Sox3P53784 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.76□□□□□ -0.37
Sox3P53784 Gm19184-201ENSMUST00000196798 928 ntBASIC12.76□□□□□ -0.37
Sox3P53784 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.76□□□□□ -0.37
Sox3P53784 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.76□□□□□ -0.37
Sox3P53784 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.76□□□□□ -0.37
Sox3P53784 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Sox3P53784 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Sox3P53784 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Sox3P53784 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox3P53784 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.75□□□□□ -0.37
Sox3P53784 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sox3P53784 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Gm16177-201ENSMUST00000120728 718 ntBASIC12.75□□□□□ -0.37
Sox3P53784 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.75□□□□□ -0.37
Sox3P53784 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.75□□□□□ -0.37
Sox3P53784 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.75□□□□□ -0.37
Sox3P53784 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sox3P53784 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.75□□□□□ -0.37
Sox3P53784 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.75□□□□□ -0.37
Sox3P53784 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sox3P53784 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sox3P53784 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sox3P53784 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox3P53784 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms