Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shmt1P50431 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shmt1P50431 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.06□□□□□ -0.16
Shmt1P50431 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shmt1P50431 Gm12742-201ENSMUST00000117326 410 ntBASIC14.06□□□□□ -0.16
Shmt1P50431 Gm12957-201ENSMUST00000117835 377 ntBASIC14.06□□□□□ -0.16
Shmt1P50431 Gm13369-201ENSMUST00000119442 987 ntBASIC14.06□□□□□ -0.16
Shmt1P50431 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.06□□□□□ -0.16
Shmt1P50431 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shmt1P50431 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.06□□□□□ -0.16
Shmt1P50431 Gm44069-201ENSMUST00000204898 506 ntBASIC14.06□□□□□ -0.16
Shmt1P50431 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.06□□□□□ -0.16
Shmt1P50431 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shmt1P50431 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.06□□□□□ -0.16
Shmt1P50431 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.06□□□□□ -0.16
Shmt1P50431 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.06□□□□□ -0.16
Shmt1P50431 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.06□□□□□ -0.16
Shmt1P50431 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Shmt1P50431 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shmt1P50431 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shmt1P50431 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shmt1P50431 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.06□□□□□ -0.16
Shmt1P50431 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Shmt1P50431 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Shmt1P50431 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shmt1P50431 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shmt1P50431 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shmt1P50431 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Shmt1P50431 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 Gm13226-201ENSMUST00000117838 404 ntBASIC14.05□□□□□ -0.16
Shmt1P50431 Gm16177-201ENSMUST00000120728 718 ntBASIC14.05□□□□□ -0.16
Shmt1P50431 Gm45841-201ENSMUST00000207700 164 ntBASIC14.05□□□□□ -0.16
Shmt1P50431 Gm29705-201ENSMUST00000212598 474 ntBASIC14.05□□□□□ -0.16
Shmt1P50431 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.05□□□□□ -0.16
Shmt1P50431 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.05□□□□□ -0.16
Shmt1P50431 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Shmt1P50431 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.05□□□□□ -0.16
Shmt1P50431 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.05□□□□□ -0.16
Shmt1P50431 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.05□□□□□ -0.16
Shmt1P50431 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shmt1P50431 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.04□□□□□ -0.16
Shmt1P50431 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.04□□□□□ -0.16
Shmt1P50431 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Shmt1P50431 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.04□□□□□ -0.16
Shmt1P50431 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.04□□□□□ -0.16
Shmt1P50431 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.04□□□□□ -0.16
Shmt1P50431 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.04□□□□□ -0.16
Shmt1P50431 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Shmt1P50431 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.04□□□□□ -0.16
Shmt1P50431 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.04□□□□□ -0.16
Shmt1P50431 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Shmt1P50431 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt1P50431 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt1P50431 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.03□□□□□ -0.16
Shmt1P50431 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt1P50431 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt1P50431 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Shmt1P50431 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt1P50431 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms