Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Prox1P48437 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prox1P48437 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prox1P48437 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prox1P48437 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Prox1P48437 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Prox1P48437 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Prox1P48437 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prox1P48437 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prox1P48437 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prox1P48437 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Prox1P48437 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prox1P48437 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Prox1P48437 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Prox1P48437 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prox1P48437 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Prox1P48437 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.77□□□□□ -0.37
Prox1P48437 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prox1P48437 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.77□□□□□ -0.37
Prox1P48437 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Prox1P48437 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.77□□□□□ -0.37
Prox1P48437 Dupd1-202ENSMUST00000224735 548 ntBASIC12.77□□□□□ -0.37
Prox1P48437 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prox1P48437 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prox1P48437 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prox1P48437 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Prox1P48437 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Prox1P48437 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prox1P48437 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prox1P48437 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Prox1P48437 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Prox1P48437 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prox1P48437 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Prox1P48437 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Prox1P48437 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Prox1P48437 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Prox1P48437 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prox1P48437 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Prox1P48437 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Prox1P48437 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prox1P48437 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Prox1P48437 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
Prox1P48437 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Prox1P48437 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prox1P48437 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Prox1P48437 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.76□□□□□ -0.37
Prox1P48437 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.76□□□□□ -0.37
Prox1P48437 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Prox1P48437 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.76□□□□□ -0.37
Prox1P48437 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Prox1P48437 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Mir698-201ENSMUST00000102164 109 ntBASIC12.76□□□□□ -0.37
Prox1P48437 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.76□□□□□ -0.37
Prox1P48437 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.76□□□□□ -0.37
Prox1P48437 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.76□□□□□ -0.37
Prox1P48437 Gm6916-202ENSMUST00000205523 195 ntBASIC12.76□□□□□ -0.37
Prox1P48437 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.76□□□□□ -0.37
Prox1P48437 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.76□□□□□ -0.37
Prox1P48437 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Prox1P48437 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Prox1P48437 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.76□□□□□ -0.37
Prox1P48437 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prox1P48437 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms