Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.58□□□□□ -0.4
Nkx2-6P43688 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.58□□□□□ -0.4
Nkx2-6P43688 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.58□□□□□ -0.4
Nkx2-6P43688 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.58□□□□□ -0.4
Nkx2-6P43688 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.58□□□□□ -0.4
Nkx2-6P43688 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Grk6-205ENSMUST00000224653 2976 ntBASIC12.57□□□□□ -0.4
Nkx2-6P43688 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.57□□□□□ -0.4
Nkx2-6P43688 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Gm38002-201ENSMUST00000193255 180 ntBASIC12.57□□□□□ -0.4
Nkx2-6P43688 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Gm10268-201ENSMUST00000085340 555 ntBASIC12.57□□□□□ -0.4
Nkx2-6P43688 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-6P43688 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Gm9257-201ENSMUST00000221254 232 ntBASIC12.56□□□□□ -0.4
Nkx2-6P43688 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.56□□□□□ -0.4
Nkx2-6P43688 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-6P43688 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 108.2 ms