Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Gm12928-201ENSMUST00000117115 573 ntBASIC10.93□□□□□ -0.66
Timp3P39876 Gm11814-201ENSMUST00000119515 929 ntBASIC10.93□□□□□ -0.66
Timp3P39876 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.93□□□□□ -0.66
Timp3P39876 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.93□□□□□ -0.66
Timp3P39876 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.93□□□□□ -0.66
Timp3P39876 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.93□□□□□ -0.66
Timp3P39876 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.93□□□□□ -0.66
Timp3P39876 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Gm6983-201ENSMUST00000214912 628 ntBASIC10.93□□□□□ -0.66
Timp3P39876 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.93□□□□□ -0.66
Timp3P39876 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.93□□□□□ -0.66
Timp3P39876 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.93□□□□□ -0.66
Timp3P39876 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Timp3P39876 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.92□□□□□ -0.66
Timp3P39876 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.92□□□□□ -0.66
Timp3P39876 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Timp3P39876 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.92□□□□□ -0.66
Timp3P39876 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Timp3P39876 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Gm15376-201ENSMUST00000122258 783 ntBASIC10.92□□□□□ -0.66
Timp3P39876 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.92□□□□□ -0.66
Timp3P39876 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Timp3P39876 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Timp3P39876 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Gm44397-201ENSMUST00000195950 113 ntBASIC10.92□□□□□ -0.66
Timp3P39876 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Timp3P39876 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.92□□□□□ -0.66
Timp3P39876 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Timp3P39876 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Timp3P39876 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.92□□□□□ -0.66
Timp3P39876 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.92□□□□□ -0.66
Timp3P39876 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Timp3P39876 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Timp3P39876 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Timp3P39876 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Timp3P39876 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Timp3P39876 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.92□□□□□ -0.66
Timp3P39876 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Timp3P39876 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.91□□□□□ -0.66
Timp3P39876 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Timp3P39876 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Timp3P39876 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.91□□□□□ -0.66
Timp3P39876 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.91□□□□□ -0.66
Timp3P39876 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.91□□□□□ -0.66
Timp3P39876 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Timp3P39876 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Timp3P39876 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms