Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.74□□□□□ -0.37
Cdh4P39038 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Cdh4P39038 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh4P39038 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdh4P39038 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh4P39038 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.74□□□□□ -0.37
Cdh4P39038 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Cdh4P39038 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh4P39038 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh4P39038 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.74□□□□□ -0.37
Cdh4P39038 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.74□□□□□ -0.37
Cdh4P39038 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh4P39038 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh4P39038 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cdh4P39038 Gm27892-201ENSMUST00000185017 106 ntBASIC12.74□□□□□ -0.37
Cdh4P39038 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh4P39038 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh4P39038 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh4P39038 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh4P39038 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh4P39038 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh4P39038 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Cdh4P39038 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.74□□□□□ -0.37
Cdh4P39038 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh4P39038 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cdh4P39038 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh4P39038 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh4P39038 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh4P39038 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.73□□□□□ -0.37
Cdh4P39038 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.73□□□□□ -0.37
Cdh4P39038 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.73□□□□□ -0.37
Cdh4P39038 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.73□□□□□ -0.37
Cdh4P39038 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cdh4P39038 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdh4P39038 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Cdh4P39038 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Mir1894-201ENSMUST00000122802 81 ntBASIC12.73□□□□□ -0.37
Cdh4P39038 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.73□□□□□ -0.37
Cdh4P39038 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Gm7287-201ENSMUST00000205267 602 ntBASIC12.73□□□□□ -0.37
Cdh4P39038 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Gm18473-201ENSMUST00000220543 868 ntBASIC12.73□□□□□ -0.37
Cdh4P39038 Itm2b-204ENSMUST00000228637 783 ntBASIC12.73□□□□□ -0.37
Cdh4P39038 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Cdh4P39038 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh4P39038 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdh4P39038 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cdh4P39038 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.72□□□□□ -0.37
Cdh4P39038 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.72□□□□□ -0.37
Cdh4P39038 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Gm6244-201ENSMUST00000178732 841 ntBASIC12.72□□□□□ -0.37
Cdh4P39038 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdh4P39038 Gm38671-201ENSMUST00000200573 130 ntBASIC12.72□□□□□ -0.37
Cdh4P39038 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh4P39038 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms