Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.01□□□□□ -0.17
Rfc1P35601 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.01□□□□□ -0.17
Rfc1P35601 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Mir1895-201ENSMUST00000122615 79 ntBASIC14.01□□□□□ -0.17
Rfc1P35601 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.01□□□□□ -0.17
Rfc1P35601 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.01□□□□□ -0.17
Rfc1P35601 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rfc1P35601 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rfc1P35601 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rfc1P35601 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rfc1P35601 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.01□□□□□ -0.17
Rfc1P35601 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rfc1P35601 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfc1P35601 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14□□□□□ -0.17
Rfc1P35601 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rfc1P35601 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14□□□□□ -0.17
Rfc1P35601 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfc1P35601 Gm6018-201ENSMUST00000216090 1306 ntBASIC14□□□□□ -0.17
Rfc1P35601 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfc1P35601 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rfc1P35601 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfc1P35601 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rfc1P35601 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14□□□□□ -0.17
Rfc1P35601 Gm13365-201ENSMUST00000121188 973 ntBASIC14□□□□□ -0.17
Rfc1P35601 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfc1P35601 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfc1P35601 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfc1P35601 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfc1P35601 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rfc1P35601 Gm38225-201ENSMUST00000194001 393 ntBASIC14□□□□□ -0.17
Rfc1P35601 AC139350.3-201ENSMUST00000226151 420 ntBASIC14□□□□□ -0.17
Rfc1P35601 AC225888.1-201ENSMUST00000227184 728 ntBASIC14□□□□□ -0.17
Rfc1P35601 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfc1P35601 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rfc1P35601 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfc1P35601 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfc1P35601 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfc1P35601 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfc1P35601 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rfc1P35601 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfc1P35601 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfc1P35601 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfc1P35601 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.99□□□□□ -0.17
Rfc1P35601 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rfc1P35601 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.99□□□□□ -0.17
Rfc1P35601 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rfc1P35601 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Gm11594-201ENSMUST00000122313 162 ntBASIC13.99□□□□□ -0.17
Rfc1P35601 Gm18889-201ENSMUST00000174284 929 ntBASIC13.99□□□□□ -0.17
Rfc1P35601 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.99□□□□□ -0.17
Rfc1P35601 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.99□□□□□ -0.17
Rfc1P35601 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.99□□□□□ -0.17
Rfc1P35601 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.99□□□□□ -0.17
Rfc1P35601 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rfc1P35601 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.99□□□□□ -0.17
Rfc1P35601 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rfc1P35601 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfc1P35601 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rfc1P35601 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms