Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Mmp3P28862 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Mmp3P28862 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Mmp3P28862 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.19□□□□□ -0.14
Mmp3P28862 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.19□□□□□ -0.14
Mmp3P28862 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp3P28862 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp3P28862 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp3P28862 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp3P28862 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp3P28862 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp3P28862 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp3P28862 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.19□□□□□ -0.14
Mmp3P28862 Gm29396-201ENSMUST00000185659 716 ntBASIC14.19□□□□□ -0.14
Mmp3P28862 Gm38158-201ENSMUST00000194617 339 ntBASIC14.19□□□□□ -0.14
Mmp3P28862 Gm38266-201ENSMUST00000194931 421 ntBASIC14.19□□□□□ -0.14
Mmp3P28862 Gm43822-201ENSMUST00000200285 476 ntBASIC14.19□□□□□ -0.14
Mmp3P28862 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.19□□□□□ -0.14
Mmp3P28862 Gm18935-201ENSMUST00000212692 664 ntBASIC14.19□□□□□ -0.14
Mmp3P28862 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp3P28862 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Mmp3P28862 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.19□□□□□ -0.14
Mmp3P28862 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp3P28862 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp3P28862 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp3P28862 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Mmp3P28862 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp3P28862 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp3P28862 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.19□□□□□ -0.14
Mmp3P28862 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp3P28862 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp3P28862 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp3P28862 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp3P28862 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.18□□□□□ -0.14
Mmp3P28862 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Mmp3P28862 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Mmp3P28862 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Gm6023-201ENSMUST00000118217 606 ntBASIC14.18□□□□□ -0.14
Mmp3P28862 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.18□□□□□ -0.14
Mmp3P28862 Gm3890-201ENSMUST00000182416 207 ntBASIC14.18□□□□□ -0.14
Mmp3P28862 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.18□□□□□ -0.14
Mmp3P28862 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.18□□□□□ -0.14
Mmp3P28862 Gm3961-201ENSMUST00000204425 994 ntBASIC14.18□□□□□ -0.14
Mmp3P28862 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.18□□□□□ -0.14
Mmp3P28862 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Mmp3P28862 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.18□□□□□ -0.14
Mmp3P28862 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.18□□□□□ -0.14
Mmp3P28862 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp3P28862 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Mmp3P28862 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Mmp3P28862 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp3P28862 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp3P28862 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp3P28862 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp3P28862 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp3P28862 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp3P28862 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Mmp3P28862 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp3P28862 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp3P28862 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.17□□□□□ -0.14
Mmp3P28862 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp3P28862 Gm13786-201ENSMUST00000122371 333 ntBASIC14.17□□□□□ -0.14
Mmp3P28862 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Mmp3P28862 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp3P28862 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.17□□□□□ -0.14
Mmp3P28862 Gm9257-201ENSMUST00000221254 232 ntBASIC14.17□□□□□ -0.14
Mmp3P28862 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp3P28862 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Mmp3P28862 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp3P28862 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.17□□□□□ -0.14
Mmp3P28862 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp3P28862 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Mmp3P28862 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.17□□□□□ -0.14
Mmp3P28862 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp3P28862 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.17□□□□□ -0.14
Mmp3P28862 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp3P28862 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms