Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Gm27838-201ENSMUST00000184829 128 ntBASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf1aP25118 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Gm17330-201ENSMUST00000221047 165 ntBASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tnfrsf1aP25118 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfrsf1aP25118 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfrsf1aP25118 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms