Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.47□□□□□ -0.41
Clk1P22518 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.47□□□□□ -0.41
Clk1P22518 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Gm15487-201ENSMUST00000122373 465 ntBASIC12.47□□□□□ -0.41
Clk1P22518 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.47□□□□□ -0.41
Clk1P22518 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.47□□□□□ -0.41
Clk1P22518 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.47□□□□□ -0.41
Clk1P22518 Gm29667-201ENSMUST00000190817 490 ntBASIC12.47□□□□□ -0.41
Clk1P22518 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Clk1P22518 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.47□□□□□ -0.41
Clk1P22518 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Clk1P22518 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Clk1P22518 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.47□□□□□ -0.41
Clk1P22518 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.46□□□□□ -0.41
Clk1P22518 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.46□□□□□ -0.41
Clk1P22518 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Syt7-204ENSMUST00000223586 1344 ntBASIC12.46□□□□□ -0.41
Clk1P22518 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Clk1P22518 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.46□□□□□ -0.41
Clk1P22518 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Clk1P22518 Gm12151-201ENSMUST00000121374 290 ntBASIC12.46□□□□□ -0.41
Clk1P22518 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Gm9522-201ENSMUST00000182394 926 ntBASIC12.46□□□□□ -0.41
Clk1P22518 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.46□□□□□ -0.41
Clk1P22518 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Clk1P22518 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.46□□□□□ -0.41
Clk1P22518 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.46□□□□□ -0.41
Clk1P22518 Gm17795-201ENSMUST00000214505 757 ntBASIC12.46□□□□□ -0.41
Clk1P22518 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Clk1P22518 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clk1P22518 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.46□□□□□ -0.41
Clk1P22518 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.46□□□□□ -0.41
Clk1P22518 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Clk1P22518 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clk1P22518 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clk1P22518 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Clk1P22518 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clk1P22518 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clk1P22518 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clk1P22518 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clk1P22518 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
Clk1P22518 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clk1P22518 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clk1P22518 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Clk1P22518 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Clk1P22518 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clk1P22518 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Clk1P22518 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.45□□□□□ -0.42
Clk1P22518 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Clk1P22518 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.45□□□□□ -0.42
Clk1P22518 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Clk1P22518 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms