Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp6P0C0A3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp6P0C0A3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp6P0C0A3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp6P0C0A3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp6P0C0A3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp6P0C0A3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Chmp6P0C0A3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp6P0C0A3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Gm12490-201ENSMUST00000120255 560 ntBASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Gm11918-201ENSMUST00000121660 179 ntBASIC14.49□□□□□ -0.09
Chmp6P0C0A3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Gm7653-201ENSMUST00000214567 508 ntBASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.49□□□□□ -0.09
Chmp6P0C0A3 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp6P0C0A3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Gm12138-201ENSMUST00000122180 951 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms